The detailed information of tRNA gene sequence


Sequence ID>WENV170971142
Genome IDMTKX01001930
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 60143
End posion on genome 60225
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aacataatgc
tRNA gene sequence 
GGGCAGGTTCCAGAGTGGCCAAATGGGACGGGCTGTAAACCCGTTGCGGAAACGCTTCGG
AGGTTCGAATCCTTCCCTGCCCAttt
Downstream region at tRNA end position 
ctccgtcaat
Secondary structure (Cloverleaf model)
>WENV170971142	Tyr	GTA
                   c      Attt ctccgtcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        T      | + | | |     G
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C A A        G     TGCGGAAACGCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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