The detailed information of tRNA gene sequence


Sequence ID>WENV170971151
Genome IDMTKX01001944
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27832
End posion on genome 27747
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGACCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCATGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGCtt
Downstream region at tRNA end position 
tcactttttt
Secondary structure (Cloverleaf model)
>WENV170971151	Ser	TGA
                   g      GCtt tcactttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      A G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCATGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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