The detailed information of tRNA gene sequence


Sequence ID>WENV170971157
Genome IDMTKX01002004
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2560
End posion on genome 2484
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaccaaaaa
tRNA gene sequence 
GGGCCCATAGCTCAGATGGTTAGAGCACCTGACTCATAATCAGGGGGTCGCTGGTTCGAT
CCCAGCTGGGCCCACAA
Downstream region at tRNA end position 
ttgacactca
Secondary structure (Cloverleaf model)
>WENV170971157	Met	CAT
                   a      ACAA ttgacactca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C T
                    T     C G A C C     A
      A G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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