The detailed information of tRNA gene sequence


Sequence ID>WENV170971167
Genome IDMTKX01002049
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 34965
End posion on genome 35040
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgccccgt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTAGAGCAGAGGAATCATAATCCTCGGGTCAGGGGTTCAAGT
CCCTTCGCCGCTACCA
Downstream region at tRNA end position 
cctcttcaag
Secondary structure (Cloverleaf model)
>WENV170971167	Met	CAT
                   t      ACCA cctcttcaag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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