The detailed information of tRNA gene sequence


Sequence ID>WENV170971174
Genome IDMTKX01002145
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 550
End posion on genome 477
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgatgcatgc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttc
Downstream region at tRNA end position 
aggnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170971174	Val	CAC
                   c      Attc aggnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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