The detailed information of tRNA gene sequence


Sequence ID>WENV170971187
Genome IDMTKX01002260
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2328
End posion on genome 2255
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tggagtgcct
tRNA gene sequence 
GGGGATGTAGCTTAGTCGGGAGAGCGCCTCCTTTGCAAGGAGGAGGTCAGGGGTTCGAGT
CCCCTCATCTCCACtg
Downstream region at tRNA end position 
taagctctgg
Secondary structure (Cloverleaf model)
>WENV170971187	Ala	TGC
                   t      ACtg taagctctgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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