The detailed information of tRNA gene sequence


Sequence ID>WENV170971195
Genome IDMTKX01002337
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4700
End posion on genome 4775
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctgccgtcct
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACACCACCCTCTCAAGGTGGCGGCACGGGTTCGAAT
CCCGTTGGGGGTGCCA
Downstream region at tRNA end position 
gtaccgaaac
Secondary structure (Cloverleaf model)
>WENV170971195	Glu	CTC
                   t      GCCA gtaccgaaac
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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