The detailed information of tRNA gene sequence


Sequence ID>WENV170971203
Genome IDMTKX01002449
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 17119
End posion on genome 17031
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cattcttatt
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTGAATCGGGCGGTCTCGAAAACCGTTGAACCCTCTGGGTTC
CGGGGGTTCGAATCCCCCTCTCTCCGCTA
Downstream region at tRNA end position 
taataaaccg
Secondary structure (Cloverleaf model)
>WENV170971203	Ser	CGA
                   t      GCTA taataaaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAACCCTCTGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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