The detailed information of tRNA gene sequence


Sequence ID>WENV170971209
Genome IDMTKX01002451
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1765
End posion on genome 1857
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
attttatatt
tRNA gene sequence 
GGCAGATTGGCTGAATTGGTTGAAAGCACCTGGCTGTAGACCAGGCACCCATGATGGTAA
ACATTCTAAGTTCGAATCTTAGGTCTGCCACCA
Downstream region at tRNA end position 
tttttgtcta
Secondary structure (Cloverleaf model)
>WENV170971209	Tyr	GTA
                   t      ACCA tttttgtcta
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     T + G          T A
                    T     G A T T C     A
    T T A A        G      | | | | |     G
  G         G T C G       C T A A G     C
  G           | | |                 T T
  T         A A G C
    T G A          A     CACCCATGATGGTAAACATT
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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