The detailed information of tRNA gene sequence


Sequence ID>WENV170971215
Genome IDMTKX01002469
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5115
End posion on genome 5199
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gttcggtatc
tRNA gene sequence 
GCCGGAGTGGCGGAACTGGCAGACGCGCACGACTCAAAATCGTGTTCCCTCGGGAGTGTG
GGTTCGATTCCCACCTTCGGCACAA
Downstream region at tRNA end position 
ggattataac
Secondary structure (Cloverleaf model)
>WENV170971215	Leu	CAA
                   c      ACAA ggattataac
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     A - T
                     G - C          T T
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCCTCGGGAGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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