The detailed information of tRNA gene sequence


Sequence ID>WENV170971230
Genome IDMTKX01002639
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 379
End posion on genome 305
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
acgacaataa
tRNA gene sequence 
GCGGGAGTAGCTCAGTGGTAGAGCATCAGCTTCCCAAGCTGAGGGTCGGGGGTTCGAGAC
CCCTTTCCCGCTCAA
Downstream region at tRNA end position 
aattcaattt
Secondary structure (Cloverleaf model)
>WENV170971230	Gly	CCC
                   a      TCAA aattcaattt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          A G
                    T     T C C C C     A
        G A        A      + | | | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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