The detailed information of tRNA gene sequence


Sequence ID>WENV170971255
Genome IDMTKX01003010
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 965
End posion on genome 872
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gattaaacgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCACAAGC
TCCCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gaataaaaat
Secondary structure (Cloverleaf model)
>WENV170971255	Ser	CGA
                   c      GCCA gaataaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCACAAGCTCCCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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