The detailed information of tRNA gene sequence


Sequence ID>WENV170971260
Genome IDMTKX01003114
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3037
End posion on genome 3113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacaacacgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCCACCA
Downstream region at tRNA end position 
tcgttaagta
Secondary structure (Cloverleaf model)
>WENV170971260	Met	CAT
                   c      ACCA tcgttaagta
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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