The detailed information of tRNA gene sequence


Sequence ID>WENV170971267
Genome IDMTKX01003199
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12267
End posion on genome 12195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttttgcgc
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGGAGGTTCGAGT
CCTCTCCCTGCTAgat
Downstream region at tRNA end position 
aggccgcctt
Secondary structure (Cloverleaf model)
>WENV170971267	Met	CAT
                   c      Agat aggccgcctt
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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