The detailed information of tRNA gene sequence


Sequence ID>WENV170971271
Genome IDMTKX01003254
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1373
End posion on genome 1286
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
atcaattcac
tRNA gene sequence 
GCCGGAGTGGCGGAACTGGCAGACGCGCTACGTTCAGGGCGTAGTGAGCACAGCGCTCGT
GAGAGTTCAAATCTCTCCTTCGGCACCA
Downstream region at tRNA end position 
aagacctcct
Secondary structure (Cloverleaf model)
>WENV170971271	Leu	CAG
                   c      ACCA aagacctcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C A A        G      | | | | |     A
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGCACAGCGCTCGT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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