The detailed information of tRNA gene sequence


Sequence ID>WENV170971276
Genome IDMTKX01003312
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 185
End posion on genome 108
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gataagtgct
tRNA gene sequence 
GGTCCCGTGGTGCAGTTTGGAGTGCACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAA
ATCCCGTCGGGACCGCCA
Downstream region at tRNA end position 
ccacagttac
Secondary structure (Cloverleaf model)
>WENV170971276	Asp	GTC
                   t      GCCA ccacagttac
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T T G A        G      + | | | |     A
  T         C G T G       G C G G G     C
  G         | | | |                 T T
  G         G C A C
    A G T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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