The detailed information of tRNA gene sequence


Sequence ID>WENV170971280
Genome IDMTKX01003350
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6404
End posion on genome 6480
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cactggcggc
tRNA gene sequence 
GGCCCCATCGTCTAGCCCGGTTAGGACACAAGGTTTTCATCCTTGTAGCAGGGGTTCAAA
TCCCCTTGGGGTCACCA
Downstream region at tRNA end position 
gcgatacggg
Secondary structure (Cloverleaf model)
>WENV170971280	Glu	TTC
                   c      ACCA gcgatacggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     TAGC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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