The detailed information of tRNA gene sequence


Sequence ID>WENV170971287
Genome IDMTKX01003445
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5106
End posion on genome 5032
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacccatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGGGTTCGAATC
CTCCCTCCGCTACAA
Downstream region at tRNA end position 
gaggagactc
Secondary structure (Cloverleaf model)
>WENV170971287	Met	CAT
                   t      ACAA gaggagactc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | + | |     G
      T     C G A G       G G G G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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