The detailed information of tRNA gene sequence


Sequence ID>WENV170971301
Genome IDMTKX01003660
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 109115
End posion on genome 109026
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgtggcgc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGCTTTCCGGTCCTCCGGA
ACGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ccgtcgctct
Secondary structure (Cloverleaf model)
>WENV170971301	Ser	TGA
                   c      GCCA ccgtcgctct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTCCGGTCCTCCGGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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