The detailed information of tRNA gene sequence


Sequence ID>WENV170971307
Genome IDMTKX01003742
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6220
End posion on genome 6129
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccgtgcggc
tRNA gene sequence 
GGAGAGATGCCGGAGCGGTTGAACGGGCCGGTTTCGAAAACCGGTGTGCCCTTGACTGGG
CACCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttttgc
Secondary structure (Cloverleaf model)
>WENV170971307	Ser	CGA
                   c      GCCA gtttttttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGCCCTTGACTGGGCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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