The detailed information of tRNA gene sequence


Sequence ID>WENV170971308
Genome IDMTKX01003742
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6019
End posion on genome 5930
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaggctgcga
tRNA gene sequence 
GGAGAGGTGTCCGAGAGGCCGAAGGAACACGCTTGGAAAGCGTGTGAGTGGGCAACTGCT
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tgtcacgnnn
Secondary structure (Cloverleaf model)
>WENV170971308	Ser	GGA
                   a      GCCA tgtcacgnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        A     TGAGTGGGCAACTGCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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