The detailed information of tRNA gene sequence


Sequence ID>WENV170971309
Genome IDMTKX01003769
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 36259
End posion on genome 36166
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaaaattc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAGTCGCCTGCTAAGCGATTAGGCGGTCTTAAACC
CGTCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttcaaataa
Secondary structure (Cloverleaf model)
>WENV170971309	Ser	GCT
                   c      GCCA gttcaaataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAGGCGGTCTTAAACCCGTCTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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