The detailed information of tRNA gene sequence


Sequence ID>WENV170971317
Genome IDMTKX01003854
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1118
End posion on genome 1191
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tataacgttc
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTTAGAGCGCATCTTTTACACAGATGAGGCCGCAGGTTCGAG
TCCTGTTCTGCCCAttt
Downstream region at tRNA end position 
tgtatttaaa
Secondary structure (Cloverleaf model)
>WENV170971317	Val	TAC
                   c      Attt tgtatttaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    T - A
                    C - G
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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