The detailed information of tRNA gene sequence


Sequence ID>WENV170971318
Genome IDMTKX01003865
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9603
End posion on genome 9528
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcctgttaa
tRNA gene sequence 
GGGCCCATAGCTCAATTGGTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAAC
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
acaggacctt
Secondary structure (Cloverleaf model)
>WENV170971318	Met	CAT
                   a      ACCA acaggacctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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