The detailed information of tRNA gene sequence


Sequence ID>WENV170971322
Genome IDMTKX01003941
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1583
End posion on genome 1494
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaattcccgC
tRNA gene sequence 
GGAAGGATGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGCTACCCGGTATCCCCGG
GTCGGGGGTTCGAATCCCCCTCCCTCCGTtc
Downstream region at tRNA end position 
ctgcgcggag
Secondary structure (Cloverleaf model)
>WENV170971322	Ser	TGA
                   C      GTtc ctgcgcggag
                     G - C
                     G - C
                     A - T
                     A   C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TACCCGGTATCCCCGGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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