The detailed information of tRNA gene sequence


Sequence ID>WENV170971324
Genome IDMTKX01003982
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 43762
End posion on genome 43838
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gattttgttt
tRNA gene sequence 
CGGGGTGTGGCGCAGTCTGGTAGCGTACGCGTCTGGGGGGCGTGGGGTCGCAAGTTCAAA
TCTTGTCACCCCGACAA
Downstream region at tRNA end position 
atcaaaaaat
Secondary structure (Cloverleaf model)
>WENV170971324	Pro	GGG
                   t      ACAA atcaaaaaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T T C     A
      T G A        G      + | | | |     A
    C       C G C G       G C A A G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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