The detailed information of tRNA gene sequence


Sequence ID>WENV170971338
Genome IDMTKX01004205
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 854
End posion on genome 781
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgggtattg
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGTTAGAGCAGGCGGCTCATAACCGCTTTGTCGCAGGTTCGATC
CCTGCCGGGCCCACtc
Downstream region at tRNA end position 
cccaggtcat
Secondary structure (Cloverleaf model)
>WENV170971338	Met	CAT
                   g      ACtc cccaggtcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TTGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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