The detailed information of tRNA gene sequence


Sequence ID>WENV170971347
Genome IDMTKX01004244
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6142
End posion on genome 6069
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtgttgatT
tRNA gene sequence 
GGGCGATTAACTCAGCGGGAGAGTGCCACCTTCACACGGTGGAAGTCATTGGTTCGAATC
CAATATCGCCCATac
Downstream region at tRNA end position 
agcactcttt
Secondary structure (Cloverleaf model)
>WENV170971347	Val	CAC
                   T      ATac agcactcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T A A C C     A
        G A        A      | | | | |     G
      C     C T C A       A T T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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