The detailed information of tRNA gene sequence


Sequence ID>WENV170971360
Genome IDMTKX01004429
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27836
End posion on genome 27909
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaacacatc
tRNA gene sequence 
GGCGGTGTAGCTCAGACGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAC
TCCCTGCACCGCCAtta
Downstream region at tRNA end position 
ttttgtctgt
Secondary structure (Cloverleaf model)
>WENV170971360	Met	CAT
                   c      Atta ttttgtctgt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     G T C C C     A
      A G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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