The detailed information of tRNA gene sequence


Sequence ID>WENV170971362
Genome IDMTKX01004493
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10375
End posion on genome 10468
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cactctgtcc
tRNA gene sequence 
GGAGAGATGTCCGAGAGGCTGAAGGAGCACGATTGGAAATCGTGTGTCCCGTCACAAAAC
GGGACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacgaaaa
Secondary structure (Cloverleaf model)
>WENV170971362	Ser	GGA
                   c      GCCA gatacgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTCCCGTCACAAAACGGGACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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