The detailed information of tRNA gene sequence


Sequence ID>WENV170971374
Genome IDMTKX01004540
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 172659
End posion on genome 172751
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaagaagggt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaataacaa
Secondary structure (Cloverleaf model)
>WENV170971374	Ser	CGA
                   t      GCCA aaaataacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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