The detailed information of tRNA gene sequence


Sequence ID>WENV170971375
Genome IDMTKX01004540
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 172773
End posion on genome 172860
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgatggaat
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGGGCGCTTGGAGAGCGTCTGGGCGGCGACGTCCC
GGGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
gaagcttcag
Secondary structure (Cloverleaf model)
>WENV170971375	Ser	GGA
                   t      GCCA gaagcttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGGCGGCGACGTCCC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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