The detailed information of tRNA gene sequence


Sequence ID>WENV170971383
Genome IDMTKX01004560
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 100839
End posion on genome 100763
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accaacttca
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCGGTGGTTCGAT
TCCACTCACCGCCACCA
Downstream region at tRNA end position 
ctcggagatc
Secondary structure (Cloverleaf model)
>WENV170971383	Met	CAT
                   a      ACCA ctcggagatc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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