The detailed information of tRNA gene sequence


Sequence ID>WENV170971389
Genome IDMTKX01004733
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2678
End posion on genome 2602
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccattaccg
tRNA gene sequence 
AGCGGTGTAGCTCAGCCGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCGAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
tttgaatcgc
Secondary structure (Cloverleaf model)
>WENV170971389	Met	CAT
                   g      ACCA tttgaatcgc
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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