The detailed information of tRNA gene sequence


Sequence ID>WENV170971402
Genome IDMTKX01004835
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 340
End posion on genome 434
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagtatattt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGACGAAAGCGCTCGCCTGGAGAGCGAGTAGGCAGGTGTAGAAC
TTGTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gagttatgcc
Secondary structure (Cloverleaf model)
>WENV170971402	Ser	GGA
                   t      GCCA gagttatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         | | |                 T T
    A       A A G C
      C G A        G     TAGGCAGGTGTAGAACTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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