The detailed information of tRNA gene sequence


Sequence ID>WENV170971413
Genome IDMTKX01005096
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4016
End posion on genome 4092
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctcctaggc
tRNA gene sequence 
GGGGCCGTAGTTCAGTTGGTTAGAACGCTGGCCTGTCACGTCAGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
aacctttccn
Secondary structure (Cloverleaf model)
>WENV170971413	Asp	GTC
                   c      GCCA aacctttccn
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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