The detailed information of tRNA gene sequence


Sequence ID>WENV170971420
Genome IDMTKX01005169
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 473
End posion on genome 399
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agtttcttaa
tRNA gene sequence 
GCCCCTGTAGTTCAACGGACAGAACGTGCCCCTCCTAAGGGCAAGATGCAGGTTCAATTC
CCGCCTGGGGTACCA
Downstream region at tRNA end position 
ctaaacatct
Secondary structure (Cloverleaf model)
>WENV170971420	Arg	CCT
                   a      ACCA ctaaacatct
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T   T
                     G - C          T T
                    T     C G C C C     A
      C A A        A      | |   | |     A
    G       C T T G       G C A G G     C
    G       | | | |                 T T
    A       G A A C
      C A          G     AGAT
                    T - A
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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