The detailed information of tRNA gene sequence


Sequence ID>WENV170971435
Genome IDMTKX01005383
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5779
End posion on genome 5704
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atttctcatt
tRNA gene sequence 
GGGGCATTAGCTCAGCCGGGAGAGCGCATGACTGGCAGTCATGAGGTCAGCGGTTCGATC
CCGCTATGCTCCACCA
Downstream region at tRNA end position 
ttttttattc
Secondary structure (Cloverleaf model)
>WENV170971435	Ala	GGC
                   t      ACCA ttttttattc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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