The detailed information of tRNA gene sequence


Sequence ID>WENV170971451
Genome IDMTKX01005570
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 100125
End posion on genome 100199
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgttgtcaa
tRNA gene sequence 
AGGGGAGTGGCTCAACGGTAGAGCAGCGGTCTCCAAAACCGCTGGTTGCAGGTTCGAATC
CTGTCTCCCCTGCCA
Downstream region at tRNA end position 
atcaaaagtc
Secondary structure (Cloverleaf model)
>WENV170971451	Trp	CCA
                   a      GCCA atcaaaagtc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
        A A        G      + | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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