The detailed information of tRNA gene sequence


Sequence ID>WENV170971458
Genome IDMTKX01005570
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27716
End posion on genome 27640
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgcttatgt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTCAGAGCTCCCGGCTCATAACCGGTCGGTCCTGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
cttacacttg
Secondary structure (Cloverleaf model)
>WENV170971458	Met	CAT
                   t      ACCA cttacacttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     CGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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