The detailed information of tRNA gene sequence


Sequence ID>WENV170971462
Genome IDMTKX01005644
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1578
End posion on genome 1653
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
taaaatttat
tRNA gene sequence 
GGGGCAATAGCTCAGTTGGAAGAGCGCGGCGTTCGCAATGCCGAGGTCGGGGGTTCGAGA
CCCCCTTGCTCCACCA
Downstream region at tRNA end position 
tttcccgaac
Secondary structure (Cloverleaf model)
>WENV170971462	Ala	CGC
                   t      ACCA tttcccgaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     A - T          A G
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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