The detailed information of tRNA gene sequence


Sequence ID>WENV170971479
Genome IDMTKX01005859
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 243
End posion on genome 333
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcttgtcgc
tRNA gene sequence 
GGAGGAATACCCAAGCGGCTGAAGGGGCAGGCTTGGAAAGCTTGTAGGCTCTTAACGGGG
CGCGAGGGTTCAAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
tcatcgttga
Secondary structure (Cloverleaf model)
>WENV170971479	Ser	GGA
                   c      GCCA tcatcgttga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGCTCTTAACGGGGCGC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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