The detailed information of tRNA gene sequence


Sequence ID>WENV170971484
Genome IDMTKX01005903
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11296
End posion on genome 11371
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagacattgT
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCATta
Downstream region at tRNA end position 
aattcttctc
Secondary structure (Cloverleaf model)
>WENV170971484	Met	CAT
                   T      ATta aattcttctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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