The detailed information of tRNA gene sequence


Sequence ID>WENV170971492
Genome IDMTKX01006150
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 885
End posion on genome 961
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccttgtattt
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGTTAGAGCGTTGCATTCACATTGCAAAGGTCTCAGGTTCGAA
TCCTGATGGGCCCACCA
Downstream region at tRNA end position 
aagaaattcg
Secondary structure (Cloverleaf model)
>WENV170971492	Val	CAC
                   t      ACCA aagaaattcg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     A G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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