The detailed information of tRNA gene sequence


Sequence ID>WENV170971496
Genome IDMTKX01006190
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54846
End posion on genome 54774
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctctcgacga
tRNA gene sequence 
TGCGGGGTGGAGCAGAGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCCCCGCTACtc
Downstream region at tRNA end position 
tgaagcagat
Secondary structure (Cloverleaf model)
>WENV170971496	Met	CAT
                   a      ACtc tgaagcagat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      A     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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