The detailed information of tRNA gene sequence


Sequence ID>WENV170971497
Genome IDMTKX01006190
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54735
End posion on genome 54663
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttggctatc
tRNA gene sequence 
GGCGAGGTAGCTCAATGGCAGAGCAGGGGACTCATAAGCCCTTGGTTGGGAGTTCAAATC
TCCCCCTCGCCACtg
Downstream region at tRNA end position 
acagaaaagc
Secondary structure (Cloverleaf model)
>WENV170971497	Met	CAT
                   c      ACtg acagaaaagc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        A A        A      | | | | |     A
      T     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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