The detailed information of tRNA gene sequence


Sequence ID>WENV170971498
Genome IDMTKX01006230
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 295
End posion on genome 382
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcaaaaacgc
tRNA gene sequence 
GCCTGGGTGGCGGAATTGGTAGACGCAAGGGACTTAAAATCCCTCGGTCCTCGCGGCTAT
GCGGGTTCAACTCCCGCCCCAGGCACCA
Downstream region at tRNA end position 
aatagaatca
Secondary structure (Cloverleaf model)
>WENV170971498	Leu	TAA
                   c      ACCA aatagaatca
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTCCTCGCGGCTAT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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