The detailed information of tRNA gene sequence


Sequence ID>WENV170971533
Genome IDMTKX01007009
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3722
End posion on genome 3797
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gccttgctgc
tRNA gene sequence 
GGTCCCATCGTCTAGAGGTCTAGGACGGGTGGTTCTCAGCCATCAAACCGGGGTTCGATT
CCCCGTGGGACCGCCA
Downstream region at tRNA end position 
tatcccttcg
Secondary structure (Cloverleaf model)
>WENV170971533	Glu	CTC
                   c      GCCA tatcccttcg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AAAC
                    G - C
                    G + T
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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