The detailed information of tRNA gene sequence


Sequence ID>WENV170971541
Genome IDMTKX01007316
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 292
End posion on genome 199
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttcaggcac
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCATAACGGGGCCGACTCGAAATCGGCTGTACGTCTAACACG
CGTACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttacaataaa
Secondary structure (Cloverleaf model)
>WENV170971541	Ser	CGA
                   c      GCCA ttacaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         A C G G
    A T A          G     TGTACGTCTAACACGCGTACC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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