The detailed information of tRNA gene sequence


Sequence ID>WENV170971542
Genome IDMTKX01007353
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15011
End posion on genome 15088
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaaatctat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTTAGCGCGCTTGACTCGGGTTCAAGAGGCCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tattaaatgt
Secondary structure (Cloverleaf model)
>WENV170971542	Pro	CGG
                   t      ACCA tattaaatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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